Difference between revisions of "Binding regions summary (analysis)"
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:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
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| − | :[[ | + | :[[Biouml.plugins.bindingregions (plugin)|biouml.plugins.bindingregions (Binding-regions related analyses)]] |
==== Description ==== | ==== Description ==== | ||
Revision as of 13:38, 17 June 2013
- Analysis title
Binding regions summary
- Provider
- Institute of Systems Biology
- Class
BindingRegionsSummary- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
Description
Summary of binding regions, density of overlaps (creation of tables: 'summaryOfBindingRegions', 'densityOfBindingRegionOverlaps', 'chart_densityOfBindingRegionOverlaps')
Parameters:
- Input track – Select input ChIP-seq track (must be the result of 'Merge binding regions for cell-lines' analysis)
- TF names table – TF names table (TF class as a row name and TF title in 'tfName' column)
- Path to output folder – Output folder will be created under this location
