Difference between revisions of "Parameter identifiability (table) (analysis)"

Revision as of 19:00, 13 February 2017

Parameter identifiability which uses tables as input

Diagram – Path to input diagram
Parameters table – Table with list of parameters to check identifiability (must contain "Min", "Max", "Val" columns)
Observables table – Table with data about observables values and time
Time column – Name of the column with time values from the "Observbles table" (will search for "time" if not selected)
Step size – Value of default step size during parameter identifiability testing
Maximum identifiability steps – Maximum number of steps during parameter identifiability testing (in one direction)
Degrees of freedom – Number of degrees of freedom
Confidence level – Confidence level which is used to define confidence interval
Optimization method parameters – Optimization method parameters
- Optimization method name – Name of optimization method to use
- Number of iterations – Number of iterations during optimization
- Populations size – Populations size
- Calculation accuracy – Calculation accuracy
- Grid length – Grid length
- Grid width – Grid width
- Number of particles – The total number of particles
Weight method (expert) – Method which will be used to evaluate weights for objective function
Weights table (expert) – Table with data about weights for observable values
Weight column (expert) – Name of the column with weights from the "Weights table" (will set weights to 1.0 if not selected)
Output path – Path to the output table