Difference between revisions of "Stem loop predictor (analysis)"
From BioUML platform
(Automatic synchronization with BioUML) |
(Automatic synchronization with BioUML) |
||
| (One intermediate revision by one user not shown) | |||
| Line 9: | Line 9: | ||
==== Description ==== | ==== Description ==== | ||
| − | Predictds microRNA stem loops | + | Predictds microRNA stem loops. |
==== Parameters: ==== | ==== Parameters: ==== | ||
| Line 24: | Line 24: | ||
[[Category:Analyses]] | [[Category:Analyses]] | ||
| − | [[Category: | + | [[Category:MicroRNA (analyses group)]] |
[[Category:ISB analyses]] | [[Category:ISB analyses]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 18:15, 9 December 2020
- Analysis title
Stem loop predictor
- Provider
- Institute of Systems Biology
- Class
StemLoopPredictor- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
[edit] Description
Predictds microRNA stem loops.
[edit] Parameters:
- inputTrack – inputTrack
- Properties for track import – Properties for track import
- Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
- Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
- match – match
- mismatch – mismatch
- gap – gap
- scoreThreshold – scoreThreshold
- outputTable – outputTable
