Difference between revisions of "Peaks to matrices (workflow)"

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(Automatic synchronization with BioUML)
 
(Automatic synchronization with BioUML)
 
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:BED file containing peaks
 
:BED file containing peaks
 
;Sequences source
 
;Sequences source
 +
:Select Ensembl version which corresponds to your input data
 
;Output folder
 
;Output folder
 
:Folder to store output
 
:Folder to store output

Latest revision as of 17:23, 16 May 2013

Workflow title
Peaks to matrices
Provider
Autosome.Ru

[edit] Workflow overview

Peaks-to-matrices-workflow-overview.png

[edit] Description

This workflow allows you to upload BED file which contains peaks produced by some peak finder, remove too short peaks and run ChIPMunk analysis to predict the motifs.

[edit] Parameters

Peaks (BED)
BED file containing peaks
Sequences source
Select Ensembl version which corresponds to your input data
Output folder
Folder to store output
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