Difference between revisions of "Biouml.plugins.genomeenhancer (plugin)"
From BioUML platform
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Analysis methods defined in this plugin: | Analysis methods defined in this plugin: | ||
*[[File:Default-analysis-icon.png]] [[Add genes from CMA (analysis)|Add genes from CMA]] | *[[File:Default-analysis-icon.png]] [[Add genes from CMA (analysis)|Add genes from CMA]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Calculate TFs regulatory score (analysis)|Calculate TFs regulatory score]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Calculate keynodes ranks (analysis)|Calculate keynodes ranks]] | ||
*[[File:BSA-Construct-composite-modules-on-tracks-with-keynodes-icon.png]] [[Construct composite modules on tracks with keynodes (analysis)|Construct composite modules on tracks with keynodes]] | *[[File:BSA-Construct-composite-modules-on-tracks-with-keynodes-icon.png]] [[Construct composite modules on tracks with keynodes (analysis)|Construct composite modules on tracks with keynodes]] | ||
*[[File:BSA-Construct-composite-modules-with-keynodes-icon.png]] [[Construct composite modules with keynodes (analysis)|Construct composite modules with keynodes]] | *[[File:BSA-Construct-composite-modules-with-keynodes-icon.png]] [[Construct composite modules with keynodes (analysis)|Construct composite modules with keynodes]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Find regulatory regions (analysis)|Find regulatory regions]] | ||
*[[File:Default-analysis-icon.png]] [[Generate dynamic model (analysis)|Generate dynamic model]] | *[[File:Default-analysis-icon.png]] [[Generate dynamic model (analysis)|Generate dynamic model]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Generate workflow from annotation diagram (analysis)|Generate workflow from annotation diagram]] | ||
| + | *[[File:Default-analysis-icon.png]] [[PSD pharmaceutical compounds analysis]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Pharmaceutical Compounds analysis]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Select keynodes with top targets (analysis)|Select keynodes with top targets]] | ||
| + | *[[File:Default-analysis-icon.png]] [[Split VCF by regulation (analysis)|Split VCF by regulation]] | ||
=== Perspectives === | === Perspectives === | ||
[[Perspective]]s defined in this plugin: | [[Perspective]]s defined in this plugin: | ||
*[[Genome Enhancer (perspective)|Genome Enhancer]] | *[[Genome Enhancer (perspective)|Genome Enhancer]] | ||
| + | *[[Platform (perspective)|Platform]] | ||
| + | |||
| + | === Reference types === | ||
| + | [[Reference type]]s defined in this plugin: | ||
| + | *[[File:ReferenceType-GEDrugBankSubstanceType-icon.png]] [[Substances - DrugBank (geneXplain)|Substances: DrugBank (geneXplain)]] | ||
| + | *[[File:ReferenceType-PCSubstanceType-icon.png]] [[Substances - Pharmaceutical compounds|Substances: Pharmaceutical compounds]] | ||
[[Category:Plugins]] | [[Category:Plugins]] | ||
[[Category:Biosoft plugins]] | [[Category:Biosoft plugins]] | ||
[[Category:Autogenerated pages]] | [[Category:Autogenerated pages]] | ||
Latest revision as of 16:35, 12 March 2019
- ID
- biouml.plugins.genomeenhancer
- Name
- Genome Enhancer
- Provider
- Biosoft
- Version
- 0.9.10
[edit] Analysis methods
Analysis methods defined in this plugin:
Add genes from CMA
- Calculate TFs regulatory score
- Calculate keynodes ranks
Construct composite modules on tracks with keynodes
Construct composite modules with keynodes
- Find regulatory regions
- Generate dynamic model
- Generate workflow from annotation diagram
- PSD pharmaceutical compounds analysis
- Pharmaceutical Compounds analysis
- Select keynodes with top targets
- Split VCF by regulation
[edit] Perspectives
Perspectives defined in this plugin:
[edit] Reference types
Reference types defined in this plugin:
