Difference between revisions of "Compare site models (analysis)"
From BioUML platform
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:[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]] | :[[Ru.biosoft.bsa (plugin)|ru.biosoft.bsa (Bio-sequences analyses plugin)]] | ||
Revision as of 11:13, 31 May 2013
- Analysis title
- File:BSA-Compare-site-models-icon.png Compare site models
- Provider
- Institute of Systems Biology
- Class
MotifCompare- Plugin
- ru.biosoft.bsa (Bio-sequences analyses plugin)
Description
Compare site models with ROC curve
Parameters:
- Site models – Site models
- Sequences – Sequences containing motifs
- Background sequences – Background sequences
- Number of permutations (expert) – Number of permutations of the sequences to perform when computing false positive rates
- Seed (expert) – Seed for random number generator
- Model FDR (expert) – Set models threshold to match specified FDR
- Output table – Output table (will be created if not exists)
