Difference between revisions of "Fold-Change calculation (analysis)"
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:[[Institute of Systems Biology]] | :[[Institute of Systems Biology]] | ||
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:[[Ru.biosoft.analysis (plugin)|ru.biosoft.analysis (Common methods of data analysis plug-in)]] | :[[Ru.biosoft.analysis (plugin)|ru.biosoft.analysis (Common methods of data analysis plug-in)]] | ||
Revision as of 11:15, 31 May 2013
- Analysis title
Fold-Change calculation
- Provider
- Institute of Systems Biology
- Class
FoldChange- Plugin
- ru.biosoft.analysis (Common methods of data analysis plug-in)
Description
Calculates fold-change values
Parameters:
- Experiment – Table with experimental(test) data
- Table – Table path
- Columns – List of columns to use
- Control – Table with control data
- Table – Table path
- Columns – List of columns to use
- Data handling – Type of fold-change: average none, average control, average experiment, average all and one to one
- Input logarithm base – Logarithm base of input data
- Result logarithm base – Logarithm base of result
- Value boundaries (expert) – All values outside these boundaries will be treated as outliers
- Lower boundary – Input values below this threshold will be ignored
- Upper boundary – Input values above this threshold will be ignored
- Output table – Output table
- Output histogram – If specified, histogram will be created showing fold-change distribution
