Difference between revisions of "GWAS format"

Revision as of 18:15, 9 December 2020

File format title

GWAS format (*.tsv, *.txt)

Element type

track

Plugin

ru.biosoft.bsa (Bio-sequences analyses plugin)

GWAS format (*.tsv, *.txt)

Import GWAS tables as tracks

Parameters:

• File to import – Specify file from your computer
• Target – Path in repository to put imported file to
• Properties – Additional importer parameters
  • Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
  • Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
  • Genome ID string – Something like 'hg18' or 'mm6'
  • Header row index – Index for row with column names, 0 means no header
  • First data row index – Index for first row with data