Heterozygous site caller (analysis)

From BioUML platform
Revision as of 17:02, 23 April 2013 by BioUML wiki Bot (Talk | contribs)

Jump to: navigation, search
Analysis title
File:BSA-Heterozygous-site-caller-icon.png Heterozygous site caller
Provider
Institute of Systems Biology

Description

Find heterozygous sites from RNA-seq data

Parameters:

  • Alignment track – BAM track with aligned reads
  • Target track – Restrict search to sites from this track
  • Min reads – Minimal number of reads at genomic position to be considered
  • Minimal fraction of second allele – Minimal fraction of second allele
  • Output track – Output track
Personal tools
Namespaces

Variants
Actions
BioUML platform
Community
Modelling
Analysis & Workflows
Collaborative research
Development
Virtual biology
Wiki
Toolbox