Fold-Change calculation (analysis)
From BioUML platform
- Analysis title
Fold-Change calculation
- Provider
- Institute of Systems Biology
- Class
FoldChange- Plugin
- ru.biosoft.analysis (Common methods of data analysis plug-in)
Description
Calculates fold-change values.
Parameters:
- Experiment – Table with experimental(test) data
- Table – Table path
- Columns – List of columns to use
- Control – Table with control data
- Table – Table path
- Columns – List of columns to use
- Data handling – Type of fold-change: average none, average control, average experiment, average all and one to one
- type – type
- inputLogarithmBase – inputLogarithmBase
- outputLogarithmBase – outputLogarithmBase
- Value boundaries (expert) – All values outside these boundaries will be treated as outliers
- Lower boundary – Input values below this threshold will be ignored
- Upper boundary – Input values above this threshold will be ignored
- Output table – Output table
- Output histogram – If specified, histogram will be created showing fold-change distribution
