Peak finders comparison (analysis)
From BioUML platform
- Analysis title
Peak finders comparison
- Provider
- Institute of Systems Biology
- Class
PeakFindersComparison- Plugin
- biouml.plugins.bindingregions (Binding-regions related analyses)
Description
Comparison of two peak finders (for example, MACS and SISSRs): lengths and numbers of TF-binding regions are compared
Parameters:
- Species – Select a taxonomical species
- First folder containing ChIP-seq tracks – First folder containing ChIP-seq tracks (created by the 1-st peak finder)
- Second folder containing ChIP-seq tracks – Second folder containing ChIP-seq tracks (created by the 2-nd peak finder)
- Path to output folder – Output folder will be created under this location when it doesn't exist
