Difference between revisions of "Transcript structure analysis"

Revision as of 19:01, 13 February 2017

Analysis title

Transcript structure analysis

Provider

Institute of Systems Biology

Class

TranscriptStructureAnalysis

Plugin

biouml.plugins.riboseq (RiboSeq Experiment)

Parameters:

• Transcript set – Transcript set
  • Annotation source – Source of gene annotation
  • Transcripts annotation track – Track with transcripts annotation in BED format
  • Genome sequence – Collection of chromosomal sequences
  • Ensembl – Ensembl database version
  • Transcript subset – Subset of transcripts used in this analysis
  • GTF file – GTF file
• Output table – Output table