Biouml.plugins.riboseq (plugin)
From BioUML platform
- ID
- biouml.plugins.riboseq
- Name
- RiboSeq Experiment
- Provider
- Institute of Systems Biology
- Version
- 0.9.10
Analysis methods
Analysis methods defined in this plugin:
ArticleComparator
- ArticleTrackCreator
- BAM filter multi-hits
- BAM filter strand specific
- BuildASiteOffsetTable
- BuildProfileModel
- ComputeProfileSums
- ComputeTranscriptProfile
- Convert genomic BAM to transcriptomic
- Count reads in transcripts
- CoverageCheker
- Estimate read density
- Find unmappable regions
- FinderArticlePoints
- Isoform TE
- Large sequence minimal unique length
- Make GTF for riboseq alignment
- Mappability histogram
- PredictStartSites
- RiboSeqExp
- SVM
- SelectionTrustClusters
- Sequence mappability
- Sequence minimal unique length
- Transcript structure analysis
- Transcriptome mappability
- Transcriptome minimal unique length
Perspectives
Perspectives defined in this plugin:
