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- Categories - ExPASy (3 revisions)
- Optimization document (3 revisions)
- Cis-module sets near given genes (analysis) (3 revisions)
- 3D viewer (3 revisions)
- Genes - BKL (3 revisions)
- Treatment Simulation (analysis) (3 revisions)
- Identification of cis-regulatory modules with given pattern of TF-classes (analysis) (3 revisions)
- Make GTF for riboseq alignment (analysis) (3 revisions)
- Merge simulation results (analysis) (3 revisions)
- Select keynodes with top targets (analysis) (3 revisions)
- Find regulatory regions (analysis) (3 revisions)
- ChIP-Seq - Identify and classify target genes (TRANSPATH(R)) (workflow) (3 revisions)
- Convert files to tracks (analysis) (3 revisions)
- Quality control analysis (3 revisions)
- Reference type (extension point) (3 revisions)
- KeyNodes hub (3 revisions)
- Server administrator (3 revisions)
- Analyze any DNA sequence, Fasta (workflow) (3 revisions)
- Transcriptome minimal unique length (analysis) (3 revisions)
- Score based FBC table builder (analysis) (3 revisions)
- Find genome variants and indels from full-genome NGS (workflow) (3 revisions)
- Site search report (analysis) (3 revisions)
- Compute differentially expressed genes (Agilent Tox probes) (workflow) (3 revisions)
- Construct composite modules on track (correlation) (analysis) (3 revisions)
- BAM filter multi-hits (analysis) (3 revisions)
- Identification of composite elements by filters (analysis) (3 revisions)
- DataFilter (host object) (3 revisions)
- JVODE (3 revisions)
- Merge table columns (analysis) (3 revisions)
- Bsa (host object) (3 revisions)
- Select random rows (analysis) (3 revisions)
- Sort SQL track (analysis) (3 revisions)
- Convert genomic BAM to transcriptomic (analysis) (3 revisions)
- Quality control metrics (analysis) (3 revisions)
- Regression analysis (3 revisions)
- SNPs in binding regions (analysis) (3 revisions)
- Filtration of predicted sites by filters (analysis) (3 revisions)
- MicroRNA finder (analysis) (3 revisions)
- CRISPR Cas9 and specific oligonucleotides (analysis) (3 revisions)
- SiteAnalysis (host object) (3 revisions)
- Perspective (extension point) (3 revisions)
- Analyze any DNA sequence, GeneBank (workflow) (3 revisions)
- Proteins (reference type) (3 revisions)
- Transcripts (reference type) (3 revisions)
- Matrices - TRANSFAC (3 revisions)
- Find longest connected chains (analysis) (3 revisions)
- Probes (reference type) (3 revisions)
- BAM filter strand specific (analysis) (3 revisions)
- Proteins - Transfac (3 revisions)
- Visible plugin (extension point) (3 revisions)
