Sequence mappability (analysis)
From BioUML platform
- Analysis title
Sequence mappability
- Provider
- Institute of Systems Biology
- Class
SequenceMappability- Plugin
- biouml.plugins.riboseq (RiboSeq Experiment)
Description
Compute sequence mappability.
Parameters:
- inputTrack – inputTrack
- Properties for track import – Properties for track import
- Sequences source – Select database to get sequences from or 'Custom' to specify sequences location manually
- Sequence collection – Specify path to folder containing sequences if 'Custom' sequences source is selected
- maxAlignsPerRead – maxAlignsPerRead
- minReadLength – minReadLength
- maxReadLength – maxReadLength
- outputTable – outputTable
